Insertion junction: CLIP2.002830_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002830
Chromosome:chromosome 10
Location:3283247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442950 (1 of 2) PF13483 - Beta-lactamase superfamily domain (Lactamase_B_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTTGATGACTGCCGTGTTAACCTGCACGATATGCAGATTGCATCAGT
Internal bar code:TATCTTCAGATATTAAGTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2186
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTACAGGTGCTTCCCCT
Suggested primer 2:AGACCTCCTCCATCTCCACC