Insertion junction: CLIP2.002831_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002831
Chromosome:chromosome 11
Location:1795232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467700 UPD1,HEME,UROD1 Uroporphyrinogen-III decarboxylase, chloroplast precursor; (1 of 1) PTHR21091//PTHR21091:SF91 - METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCCCCTGTGACCACGCTGACAACACAAACGTCTCTTCGTCCGTTTG
Internal bar code:GATGCTCAGGGTTACATTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1867
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:141
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:141

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAGATCCCAACTGCCAT
Suggested primer 2:CTCTACCCCCTCTCCTTGCT