Insertion junction: CLIP2.002832_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002832
Chromosome:chromosome 2
Location:3474333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099000 SYP71 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGCAGACCACCGCCCGCTGCCCCGCAGCGACGAATGCACATCCTTG
Internal bar code:CTCTTTTCTTTGCTTCACGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4147
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGTACGGCACCTGACAC
Suggested primer 2:CGTCAAGAGGAGTCGATCGG