Insertion junction: CLIP2.002848_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002848
Chromosome:chromosome 2
Location:3370419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098200 CGL103,PRT1 (1 of 1) PF00569//PF13920 - Zinc finger, ZZ type (ZZ) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3); Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCGGTGACAGTCCAGCTGCGAGCCGCGTGGTCTGTCCCACGCCTGGG
Internal bar code:AAAGCAGGGAATTTTGATGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2060
LEAP-Seq percent confirming:76.7442
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AAATAGCCGCCCTATCAGCC
Suggested primer 2:TGGACAGGACCATGTTCACG