Insertion junction: CLIP2.002859_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002859
Chromosome:chromosome 3
Location:5894101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188650 PLAP2,PLP2 Plastid lipid associated protein 2; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGAGCACAAGGAAAACATTACGCGTAGGACAGTCTGTGTGTGTATGTG
Internal bar code:TTGAATTCTCGGCGGAGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:830
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGAGGCTCAAAACGCGTG
Suggested primer 2:CCTGCTACCAAAAGACCCGT