Insertion junction: CLIP2.002862_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002862
Chromosome:chromosome 11
Location:1175421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467682 (1 of 2) IPR005645//IPR029058 - Serine hydrolase FSH // Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCTCTTGCTACCTCACCCACATTTGCTGCCTCACCCACAGGGTGCGG
Internal bar code:GCGGTTGTTTTCAGGAACTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2385
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGAGGATTCGGCCAGACG
Suggested primer 2:CACCACTGCTTCAACGGTTG