Insertion junction: CLIP2.002864_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002864
Chromosome:chromosome 7
Location:3692597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g337650 PDC1 Mitochondrial pyruvate dehydrogenase complex, E1 component, alpha subunit; (1 of 1) PTHR11516//PTHR11516:SF40 - PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR // PDHA1 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGAAATGGGAGGGCAGGGTGGAGGGCGCTGGAGTCGAGTAGAGGAA
Internal bar code:ACAGGGAATGACGGCGGAAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGGGCTTGTTGACTTTG
Suggested primer 2:GCCCTCGATTAAGGTGGAGG