Insertion junction: CLIP2.002867_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002867
Chromosome:chromosome 5
Location:911087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246551 (1 of 1) IPR000104//IPR001810//IPR020683 - Antifreeze protein, type I // F-box domain // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGGTTCTGGCCAGGGGAGGGCCAGGGGCTGCAGGGGAGGGCCAGGGG
Internal bar code:CCGCGCGGATACAGTTGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1743
LEAP-Seq percent confirming:91.5254
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATGTAGCTCCCGCATGT
Suggested primer 2:TTGCTTGCCGGGTTGAATTG