Insertion junction: CLIP2.002870_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002870
Chromosome:chromosome 7
Location:1185306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321200 (1 of 5) PTHR13271//PTHR13271:SF28 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED 5'UTR_intron
Cre07.g321250 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAACTATTAAACGTATCAATGTCCTGTCATGAATAATGTAGGGGGTTCA
Internal bar code:CATTGCAAATTTTTTCGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2164
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GACCATGGGAAGGGTTCAGG
Suggested primer 2:CTAGGACATCCGCTGCTGAG