Insertion junction: CLIP2.002872_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002872
Chromosome:chromosome 3
Location:589348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145387 FAP239 Coiled-Coil Flagellar Associated Protein 239 5'UTR
Cre03.g145407 (1 of 2) IPR000571//IPR002110//IPR020683 - Zinc finger, CCCH-type // Ankyrin repeat // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACGGTAATATGTACAGTGTTGGCTATCTATAACATACATAACTATCAG
Internal bar code:CAGGGTAGAAAGAGACTAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4661
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCCTCGTATGTGAGCTC
Suggested primer 2:TCCGACCTGCTCTGAACAAC