Insertion junction: CLIP2.002876_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002876
Chromosome:chromosome 3
Location:4808739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178100 MOT51 (1 of 1) PTHR10877//PTHR10877:SF116 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; Predicted protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATAAACAGCGCGTGCGCCTGCTCCTCCGAGACCCGGACGCTGAACTT
Internal bar code:AAGGTCTTAAGGCGCGTTGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2053
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATGTTGCCGTTGTGCTG
Suggested primer 2:TGCTTGGCACGTACAGATGT