Insertion junction: CLIP2.002876_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002876
Chromosome:chromosome 9
Location:6563092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416200 HCF107,MBB1 PsbB mRNA maturation factor; (1 of 1) PTHR11246//PTHR11246:SF11 - PRE-MRNA SPLICING FACTOR // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTACGTACGACCGGCGCATACTTTCCACTGCCATGCCCGGCGCATCT
Internal bar code:GAGCGGCGGCACTGCTTTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2344
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CATGAGCTACCGTGCCGTAT
Suggested primer 2:TGGCCTTTCCTAGCACATGG