Insertion junction: CLIP2.002888_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002888
Chromosome:chromosome 2
Location:4905103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109950 HLIP,LIL2,OHP1 (1 of 1) PTHR14154:SF11 - HIGH-LIGHT-INDUCED PROTEIN, CHLOROPLASTIC; One-Helix Protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCCCAAGCAGCCGGATGTGCCGCCCCCGAAGAATGGCTTTGTGGAC
Internal bar code:ACGGCTTAGGGAGCGATTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1736
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACATACCGGGCTCGCTTATG
Suggested primer 2:GAAGTACTTTTGGCCGCAGC