Insertion junction: CLIP2.002900_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002900
Chromosome:chromosome 9
Location:3503635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396289 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTCTTCCTGTTGGAACGGCCGTCCAGTCGCATTGTGTCTTCCGCCAT
Internal bar code:TCGAGAAGGAAAGGCCGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTTTCCTTTCTTGCGC
Suggested primer 2:TAACACAAGCTGCTGCCGTA