Insertion junction: CLIP2.002904_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002904
Chromosome:chromosome 12
Location:1655795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486600 MEX1 (1 of 1) PTHR34809//PTHR34809:SF1 - FAMILY NOT NAMED // MALTOSE EXCESS PROTEIN 1, CHLOROPLASTIC-RELATED; Maltose exporter-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGAGTTGGCTATGGTTTCAGCGCTGTCTTCAGGGCCCCTATCAGTTCG
Internal bar code:TGGTTTGTATCATTGGTACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2183
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGAGGAGGACGGTATT
Suggested primer 2:AGTGGGTCAGGTCCTCAAGT