Insertion junction: CLIP2.002907_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002907
Chromosome:chromosome 10
Location:2517881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436000 POC2 Proteome of centriole protein 2; (1 of 2) PTHR10877//PTHR10877:SF135 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED intron
Cre10.g436050 FSD1 Fe superoxide dismutase; (1 of 1) PTHR11404//PTHR11404:SF8 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [FE] 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGCTGGCCAGCGCCGCGCTGTGCGCCCCGCTTCGGGCCGTCGCGCT
Internal bar code:GGGTTCCAGCTACGTTTACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2290
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTCAAAGAACCGTGTGC
Suggested primer 2:CCGTGTAGTACAGCCGATCC