Insertion junction: CLIP2.002916_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002916
Chromosome:chromosome 17
Location:532166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699450 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGAAGACACCTGACCACACCCCGGGCCCCCCACCAGGACCGCACTCA
Internal bar code:TGTTTTTACCCCGAATACTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2563
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGACGAGGATGAGGAA
Suggested primer 2:GGGACAAAGCGTTGCTGAAG