Insertion junction: CLIP2.002917_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002917
Chromosome:chromosome 7
Location:1097762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320350 CDJ5 (1 of 3) PF00226//PF13370 - DnaJ domain (DnaJ) // 4Fe-4S single cluster domain of Ferredoxin I (Fer4_13); Chloroplast DnaJ-like protein 5 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCACGCCACGGCAACTATCACAGCGTGCTTCACAACCGCCTCTAAGTG
Internal bar code:GTTCTGAAGTTAGGTAATGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1443
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCGCTGGTGTTGTGTGAT
Suggested primer 2:TGCACTCTCTGAACGTGGAC