Insertion junction: CLIP2.002919_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002919
Chromosome:chromosome 9
Location:5319066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407501 (1 of 5) 3.2.1.3 - Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTGTGCGGGAAACCATATGTTCGGAACGCCGGGAGCTGAGTTAAGCA
Internal bar code:GGTCCACGGAACAATTTCAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1400
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGCTCGCTATGCAACTG
Suggested primer 2:GCCGTCGATAACAATGGCAC