Insertion junction: CLIP2.002927_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002927
Chromosome:chromosome 16
Location:110458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695450 SPL11,UAF4 U2 snRNP auxiliary factor, large subunit; (1 of 1) PTHR23139:SF68 - ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGCGGCAGCGTCCATGCGTCTGCCGTGGGCTCGCCACCCGCCTCACC
Internal bar code:CCTGATAACCATGCAAACCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:340
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TACACGCCATCAGCCCTTAC
Suggested primer 2:CCTTCTACTACCTGCGGCAG