Insertion junction: CLIP2.002934_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002934
Chromosome:chromosome 6
Location:5882163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289600 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGATGCAAGCCCATTCCCCGGTCTGCTGTGTGGAAGGAGCCGTGCAG
Internal bar code:ATTAAATTATAAGCGAGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2549
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGGTTGAGGATGGAGGA
Suggested primer 2:GTGGACCTCCTCGACTCAGA