Insertion junction: CLIP2.002935_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002935
Chromosome:chromosome 1
Location:3700236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024050 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCGCAAGCTCTGACTGATAGCGGATGAGACAGCAGGTGGCAGCGGCA
Internal bar code:GCCGCGGAGGGGATCATATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1331
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCTTCTCGTAGTAGCTG
Suggested primer 2:GGCCATTTCCTTCTCTGCCT