Insertion junction: CLIP2.002938_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002938
Chromosome:chromosome 9
Location:2297425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394550 RPPK2 ribose-phosphate pyrophosphokinase; (1 of 1) PTHR10210//PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCAACGTAGCCACCCTCCAGCGCTCAGACAACACACTCAACAACATC
Internal bar code:CGGAAATGACGCGTGGGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4048
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCATGGGGACTGGTCAG
Suggested primer 2:CAAGATGCGCTCATGAAGGC