Insertion junction: CLIP2.002940_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002940
Chromosome:chromosome 13
Location:619539
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565750 EFG4 (1 of 1) K14416 - elongation factor 1 alpha-like protein (HBS1); Translation elongation factor Tu family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGACGCAAGGGCGGCGCTGATGCAATGCAGGGCGAGCCGCCAGGC
Internal bar code:TCGTTGATTGGAACTCTTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1093
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGAAACCGTCCAGAGACC
Suggested primer 2:ACACGCTCACTCCCTCCTAT