Insertion junction: CLIP2.002943_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002943
Chromosome:chromosome 10
Location:2487796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435850 CPLD24 conserved expressed protein, perhaps chloroplast targetted; (1 of 23) IPR008927 - 6-phosphogluconate dehydrogenase C-terminal domain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCATCATCACTGGTGAGCTCCGGCAACGACCCGAGCTCTGGGCCCGG
Internal bar code:GATTGGTAGAGGATCGTAGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACGCTCCGATCACGTTA
Suggested primer 2:AGAAGCGAGGCGTGTGTAAA