Insertion junction: CLIP2.002948_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002948
Chromosome:chromosome 13
Location:3031566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g584350 (1 of 100) IPR001810 - F-box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACGGCCGGAACGGAGCAAGGCCAGTCAGGGGAGATATCCGAGGCGCCA
Internal bar code:TCGGGAATGAATCGTAGCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3007
LEAP-Seq percent confirming:78.125
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGTCATACCCGCAGTGCA
Suggested primer 2:CCTCACCATGCTAGAGCTCG