Insertion junction: CLIP2.002952_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002952
Chromosome:chromosome 6
Location:297797
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g250850 MSH1 DNA mismatch repair protein, MutS homolog; (1 of 1) PTHR11361:SF82 - DNA MISMATCH REPAIR PROTEIN MSH1, MITOCHONDRIAL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCATCAGCTGCCGCACCTTGGTGGGCAGCGCGCTAAAGCCGCCGCCC
Internal bar code:CAACGAGCTGGCGTGTGGCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:204
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGATGGGTGGGATCTGTG
Suggested primer 2:CAAACAATGCATGGTGGCCA