Insertion junction: CLIP2.002970_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002970
Chromosome:chromosome 3
Location:4109254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172500 PTO2,PTOX2 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACGTGGTGTGCCGACCTCCCTCAAAACACCAGCCCCAGCGGCTAGCC
Internal bar code:CAGGGCATATCCGGGTTTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2465
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTCGTAGCTGTCGGCCAT
Suggested primer 2:GCATACACCGATCCGCAAAC