Insertion junction: CLIP2.002970_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002970
Chromosome:chromosome 3
Location:4109254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172500 PTO2,PTOX2 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTGAACCCACAACTCACCACTGTCCCCCGACATCTTACCCCCACTCC
Internal bar code:AGAATGTTCGGGGTGAGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4417
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:GCATACACCGATCCGCAAAC
Suggested primer 2:TTTTCGTAGCTGTCGGCCAT