Insertion junction: CLIP2.002976_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002976
Chromosome:chromosome 3
Location:2557005
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159851 (1 of 2) IPR001623//IPR002110//IPR020683 - DnaJ domain // Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACAGCACTCACCACCTCAGCAGCTCCACACGCAGACGCTTCTTGATG
Internal bar code:ACGGGCCATAAATTACTTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2247
LEAP-Seq percent confirming:81.0811
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCATGCAGTGATGACATG
Suggested primer 2:AAAGCACTCAAGGACTCCGG