Insertion junction: CLIP2.002979_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002979
Chromosome:chromosome 3
Location:1979495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155600 (1 of 2) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCTGGCCAATAATGACCGCCGTGGCTGTGGCCGTTGCCACTCCGGAG
Internal bar code:TAAGTAAGTCGCGCGCCGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5417
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCCGGAAGCAACAGGAG
Suggested primer 2:CCCTCATTTCTGCTCTGCCA