Insertion junction: CLIP2.002981_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002981
Chromosome:chromosome 7
Location:961719
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319300 GWD1 Alpha-glucan water dikinase 1; (1 of 1) K08244 - alpha-glucan, water dikinase (E2.7.9.4) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGCTGACGCCCCAGTGCAGCACCACGTCCGAGGCCGTGTCCGTCAC
Internal bar code:ATTTTCGGGAGCTGAGTATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1390
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAAAGATGTAACCGGGG
Suggested primer 2:GTCGTTGAATTCAGAGCCGC