Insertion junction: CLIP2.002988_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002988
Chromosome:chromosome 8
Location:3537256
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g379200 CPLD18 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR33471//PTHR33471:SF5 - FAMILY NOT NAMED // EXPRESSED PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGCAAGAAAGGCGCAGAGCAACAGTTGGCATACATACTTGAGAACTT
Internal bar code:GCAGTCGAACCCAGGATTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:333
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTGCTGTCAGTGGTTAT
Suggested primer 2:TCTCCTCCTCCCGCTCTAAC