Insertion junction: CLIP2.003002_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003002
Chromosome:chromosome 6
Location:8674231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310050 CPL13 Conserved in the Plant Lineage; (1 of 1) PTHR10794//PTHR10794:SF53 - ABHYDROLASE DOMAIN-CONTAINING PROTEIN // CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGGGAGGGCACGGTACTACAGGATACCGTACGTCCACAGCCCTAGC
Internal bar code:GGTTGGACTTCTTAGTCTCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:433
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGAGTTCGTGGAGCACA
Suggested primer 2:CTCCTCCTCGCTCTTTTGCA