Insertion junction: CLIP2.003005_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003005
Chromosome:chromosome 8
Location:2273570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370750 (1 of 1) IPR021934 - Sox C-terminal transactivation domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGACATGCAAAATTGGCGCCAGACCACACACAGTATGCCGCCGTGCCG
Internal bar code:CTTAATAGAATGGATTAATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1356
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGCACAGTGAGCTATT
Suggested primer 2:GCTGATGTTGCTGCTACTGC