Insertion junction: CLIP2.003007_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003007
Chromosome:chromosome 17
Location:4082297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728800 IDH1 (1 of 1) PTHR11835:SF42 - ISOCITRATE DEHYDROGENASE [NAD] SUBUNIT BETA, MITOCHONDRIAL; Isocitrate dehydrogenase, NAD-dependent intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATGCTTACTGCGAGTCCCTCGCCCCCGGCAACGGCAGCGCGGGCGAG
Internal bar code:TCCGGTTAGGTGAGGTTTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3076
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAAGTTGGGGGAATGCC
Suggested primer 2:GTGTGTAGGGTTTGAGGGGG