Insertion junction: CLIP2.003007_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003007
Chromosome:chromosome 17
Location:4082299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728800 IDH1 (1 of 1) PTHR11835:SF42 - ISOCITRATE DEHYDROGENASE [NAD] SUBUNIT BETA, MITOCHONDRIAL; Isocitrate dehydrogenase, NAD-dependent intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGTTGAAGTAACATTCATGGGTGACCACACACTGTCTGGTCGTCGAT
Internal bar code:TCCGGTTAGGTGAGGTTTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1241
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTAGGGTTTGAGGGGG
Suggested primer 2:TACGAAGTTGGGGGAATGCC