Insertion junction: CLIP2.003015_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003015
Chromosome:chromosome 11
Location:1518885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468750 CPLD48 Conserved in the Plant Lineage and Diatoms; (1 of 3) PF07386 - Protein of unknown function (DUF1499) (DUF1499) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGAACCTGTGCCCTCCCTCGCCCAACTGCATTGCCACCTCCGAGGA
Internal bar code:TATCCCACCATTCACGTGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1362
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGTGTCAGGTCAAGTT
Suggested primer 2:AATGCTGGTATCGAGCTCGG