Insertion junction: CLIP2.003015_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003015
Chromosome:chromosome 11
Location:1518910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468750 CPLD48 Conserved in the Plant Lineage and Diatoms; (1 of 3) PF07386 - Protein of unknown function (DUF1499) (DUF1499) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCCAGGTTGCCGGGGCGAGGGGCCGCGCCGATGGACAGCAGCGCGCC
Internal bar code:AGACAGACCACCCTTTCAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1417
LEAP-Seq percent confirming:9.80392
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:92
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCTGGTATCGAGCTCGG
Suggested primer 2:TGTGCGTGTCAGGTCAAGTT