Insertion junction: CLIP2.003020_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003020
Chromosome:chromosome 2
Location:1767286
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086550 CGL122 (1 of 4) K06941 - 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] (rlmN); predicted Fe-S-cluster redox enzyme CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCCCCAAACGTTGCGCCGCGTGCTCCCACCGCTAGCGTGCGCTGTGT
Internal bar code:CAGCCGCGTATAGTTGGAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4718
LEAP-Seq percent confirming:97.2603
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCGACTTTCTCCACGAA
Suggested primer 2:GACGGTGGGTTTGAAACAGC