Insertion junction: CLIP2.003025_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003025
Chromosome:chromosome 16
Location:6239619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676450 CPLD39 Conserved in the Plant Lineage and Diatoms 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCGTCAAGGAAGCCTGGTAGGTTCCGCATGAACATTCCTTGTTGGGT
Internal bar code:AGCATTGTAGTGCCTGTCCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1729
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGCTCGAAACCTGCCAG
Suggested primer 2:GCTGGGCAAGTATGAATGCG