Insertion junction: CLIP2.003029_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003029
Chromosome:chromosome 3
Location:3502893
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167400 (1 of 1) PF11282 - Protein of unknown function (DUF3082) (DUF3082) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCGTAAAGCTGGCATTCTAGTATGCATCGTGGGTGTCTATGCAGCTC
Internal bar code:AGCATTTCAGAACTTTTTAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGCCCAGAATGATGGTG
Suggested primer 2:CAAGATAACACGAGCAGCGC