Insertion junction: CLIP2.003031_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003031
Chromosome:chromosome 5
Location:770348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g245701 FAP104 Flagellar Associated Protein 104 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGAGAGGAGGCTCACACGCCCCGCCCTGGGCTGCGCCCCGGCCGCT
Internal bar code:TCGTATGTTTGGACGAGCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:677
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGCAGTGAAGCAGTGGAG
Suggested primer 2:TTTTGCGGTGAGTGCCATTG