Insertion junction: CLIP2.003032_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003032
Chromosome:chromosome 9
Location:2294950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394550 RPPK2 ribose-phosphate pyrophosphokinase; (1 of 1) PTHR10210//PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTTCATTGCGACACCGGCCGGCACCGGCACCGACAAGCGCCGACGGC
Internal bar code:CGGGAGATCGTTTCGATTAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3698
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCGCCTTTTCACTTTGCA
Suggested primer 2:AGCAGCACCGATAATCTCCG