Insertion junction: CLIP2.003042_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003042
Chromosome:chromosome 1
Location:2764171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016750 PSBS2 (1 of 2) K03542 - photosystem II 22kDa protein (psbS); chloroplast Photosystem II-associated 22 kDa protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAGGCGACTGGCCTGCCCGCGCCCGCCATCAACGGCAAGCAGTTCCC
Internal bar code:CTTAAGCTATAGCCAGCTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5748
LEAP-Seq percent confirming:68.8172
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTCGTTCTCCTTGGTG
Suggested primer 2:TTAAGCCCCCGAACACCATC