Insertion junction: CLIP2.003042_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003042
Chromosome:chromosome 1
Location:2764172
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016750 PSBS2 (1 of 2) K03542 - photosystem II 22kDa protein (psbS); chloroplast Photosystem II-associated 22 kDa protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGCTCCACCTCGGTCTTGCTGGCCAGCTGTTTGGGACAGGCAGCATA
Internal bar code:TCAGCCTCATTAGAAGGGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2192
LEAP-Seq percent confirming:94.8276
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TTAAGCCCCCGAACACCATC
Suggested primer 2:ACAGCTCGTTCTCCTTGGTG