Insertion junction: CLIP2.003044_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003044
Chromosome:chromosome 11
Location:1237233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467692 (1 of 5) PF07466 - Protein of unknown function (DUF1517) (DUF1517) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTTTTTATCTCGGAACGTGTGAGTCACCATCATTCCCATGCGCCCTG
Internal bar code:TGGGCCGTATTAATAACGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:696
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGAGAGGGGATGATGAG
Suggested primer 2:GCGTCTACCTCATTCCTCGG