Insertion junction: CLIP2.003055_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003055
Chromosome:chromosome 12
Location:3571308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGTTTCCCTCCACATACACATACGCAGAGCGCGTCGTGTCGTGCGGT
Internal bar code:GCTCGGATGCAGGAGGCAACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1930
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGTCACAAGCGCCTTTG
Suggested primer 2:GTCAGAGGGACAACGACCAG