Insertion junction: CLIP2.003058_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003058
Chromosome:chromosome 13
Location:665970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566200 CGL112 possible transcription factor; (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGCTTAACCTACCTAACCTGGCTAAACCTTATTCCGCCGCCCCGCC
Internal bar code:CAATTGTTGTGAAGAAGAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1496
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGTGTGTGTGGGCAAAT
Suggested primer 2:ACGGAGTCTTTGAGTGCTGG