Insertion junction: CLIP2.003065_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003065
Chromosome:chromosome 9
Location:1049450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402051 CLV4 Voltage-gated chloride channel; (1 of 1) PTHR11689//PTHR11689:SF89 - CHLORIDE CHANNEL // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCCTGATGGTACGGCACACCGCCTCCTGCCGCACCAGCCATCGCCTG
Internal bar code:AACTTGTGTGATTAGATGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:123
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCACGCTGTCTACCTT
Suggested primer 2:GGATGAGGTTGTGGAGGTGG